Section Gene Symbol Age Orientation Objective Veracity Veracity Support
T thyrotropin releasing hormone receptor Trhr P7 Horizontal 10X Confirmed
  • Matches In Situ Data
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    BX BAC Address marker
    BX3055 RP23-136B22 Td-Tomato
    Other cross-sections of this brain:GENSAT Brain Atlas, expression of gene Trhr in mouse age P7, brightfield image
    C    		GENSAT Brain Atlas, expression of gene Trhr in mouse age P7, brightfield image
    L    		GENSAT Brain Atlas, expression of gene Trhr in mouse age P7, brightfield image
    T    		(thumbnails not to scale)
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  • Founder Line: TB23-TOM
  • UCSC Genome Browser for this BAC Address: RP23-136B22
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    Comment on this Gene:
    The BAC data is consistent with the literature and the in situ data from Allen database and genepaint.org. Confirmed expression sites include motor nuclei in brainstem, motor neurons in spinal cord, AOB (at P7), basal forebrain, amygdala, hypothalamus and substantia nigra. One of the cited papers reports expression of Trhr mRNA in hippocampus and cortex, which is also seen in P7 BAC data and the in situ data from genepaint.org. The BAC detects expression in caudate putamen, mainly confined to the rostral side. The expression is confirmed by the in situ data from genepaint.org. At adult, the BAC shows little expression in accessory olfactory bulb, which is positive in Allen in situ data.


    Other image sets for Trhr
    age orientation Acquisition technique Founder Line Batch
    adult Horizontal brightfield HU193 3 images
    adult Sagittal brightfield HU193 10 images
    P7 Horizontal brightfield HU193 3 images
    P7 Horizontal brightfield TB23-TOM 3 images
    P7 Sagittal brightfield HU193 11 images
    P7 Sagittal brightfield TB23-TOM 11 images
    P7 Sagittal confocal HU193 3 images
    E15.5 Horizontal brightfield HU193 3 images
    E15.5 Sagittal brightfield HU193 10 images

    BGEM Probe Related ISH images
    Trhr 2276

    Supporting literature:
    PubMed ID
    1280790
    1488129
    8387653
    11064370


    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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