Section Gene Symbol Age Orientation Objective Veracity Veracity Support
C cystatin C Cst3 E15.5 Horizontal 10X Confirmed
  • Matches In Situ Data
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    BX BAC Address marker
    BX2542 RP23-389I20 EGFP
    Other cross-sections of this brain:GENSAT Brain Atlas, expression of gene Cst3 in mouse age E15.5, brightfield image
    C    		GENSAT Brain Atlas, expression of gene Cst3 in mouse age E15.5, brightfield image
    L    		GENSAT Brain Atlas, expression of gene Cst3 in mouse age E15.5, brightfield image
    T    		(thumbnails not to scale)
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  • Founder Line: PE159
  • See all MMRRC strains for : Cst3
  • Get this mouse from MMRRC: STOCK Tg(Cst3-EGFP)PE159Gsat/Mmucd: Details, Order
  • Get this BAC Clone from CHORI: BX2542
  • UCSC Genome Browser for this BAC Address: RP23-389I20
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    mouse brain atlas sectionC
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    Comment on this Gene:
    No detailed expression literature found. The two cited papers don_t correlate well. One paper reports that Cst3 is expressed in cortical neurons of layer 3 and 5 in human, which seems to be confirmed by BGEM P7 in situ data. The other paper reports the gene is expressed in astrocytes, which is supported by the in situ data from Allen database. The BAC data is consistent with Allen in situ data. EGFP expression is mostly present in glial cells across the CNS.


    Other image sets for Cst3
    age orientation Acquisition technique Founder Line Batch
    adult Horizontal brightfield PE159 3 images
    adult Sagittal brightfield PE159 10 images
    P7 Horizontal brightfield PE159 3 images
    P7 Sagittal brightfield PE159 11 images
    E15.5 Horizontal brightfield PE159 3 images
    E15.5 Sagittal brightfield PE159 10 images

    BGEM Probe Related ISH images
    Cst3 1302

    Supporting literature:
    PubMed ID
    11549598
    15509901


    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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