GENSAT Project at Rockefeller University, Mouse Brain Atlas, Image Navigator

Section	Gene	Symbol	Age	Orientation	Objective	Veracity	Veracity Support
02	glutamate receptor, ionotropic, NMDA1 (zeta 1)	Grin1	E15.5	Sagittal	10X	Confirmed	Matches In Situ Data Supported by Literature

BX	BAC Address	marker
BX2507	RP23-155M5	EGFP

Other cross-sections of this brain:

GENSAT Brain Atlas, expression of gene Grin1 in mouse age E15.5, brightfield image

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Founder Line: OH37

See all MMRRC strains for : Grin1

Get this mouse from MMRRC: STOCK Tg(Grin1-EGFP)OH37Gsat/Mmucd: Details, Order

Get this BAC Clone from CHORI: BX2507

UCSC Genome Browser for this BAC Address: RP23-155M5

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Comment on this Gene:
The BAC data is very incomplete compared with the cited papers and the in situ data from BGEM and Allen database. Grin1 mRNA is shown to be widely expressed across the CNS. However, in the BAC data, EGFP expression is confined to upper layers of the cortex, dorsal caudate putamen and SNR.

Other image sets for Grin1

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	OH37	3 images
adult	Sagittal	brightfield	OH37	10 images
P7	Horizontal	brightfield	OH37	3 images
P7	Sagittal	brightfield	OH37	11 images
E15.5	Horizontal	brightfield	OH37	3 images
E15.5	Sagittal	brightfield	OH37	10 images

BGEM Probe	Related ISH images
Grin1	221

Supporting literature:

PubMed ID
18729205
7518474

Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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