Structure Gene Symbol Age Orientation Objective Veracity Veracity Support
Cerebellum gap junction protein, alpha 1 Gja1 P7 Sagittal 50X Confirmed
  • Matches In Situ Data
  • Supported by Literature
    		•
    BX BAC Address marker
    BX1977 RP24-289B3 EGFP
    Other structures in this brain:GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    CER    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    MED    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    MID    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    OLF    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    OTH1    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    OTH2    		GENSAT Brain Atlas, expression of gene Gja1 in mouse age P7, confocal image
    PIT
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  • Founder Line: KB40
  • See all MMRRC strains for : Gja1
  • Get this mouse from MMRRC: STOCK Tg(Gja1-EGFP)KB40Gsat/Mmucd: Details, Order
  • Get this BAC Clone from CHORI: BX1977
  • UCSC Genome Browser for this BAC Address: RP24-289B3
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  • Read gene expression annotations for this image
  • View other image sets for Gja1
    • GENSAT Mouse Brain Atlas, expression of gene Gja1 in the Cerebellum of P7 mouse. Gja1 is expressed in Purkinje neurons in the cerebellum. Compare this confocal image with brightfield section 8.
    Gja1 is expressed in Purkinje neurons in the cerebellum. Compare this confocal image with brightfield section 8.
    Comment on this Gene:
    The P7 BAC data is consistent with both the literature and BGEM in situ data. The EGFP reporter gene expression can be detected in both neurons and glia. At E15-5, the BAC data overlaps with the in situ data from Genepaint.org. In the developing cortex, the postmitotic cells are stained due to the stability of EGFP protein. However, at adult, the level of EGFP expression is significantly decreased. The adult BAC data is not consistent with the in situ data.

    Gene Expression Annotations for this image
    structureExpression LevelExpression PatternCell typesSubtypes
    Cerebellumweak signalregion-specific
  • neuron
  • Purkinje cell


    • Other image sets for Gja1
    age orientation Acquisition technique Founder Line Batch
    P7 Horizontal brightfield KB40 3 images
    P7 Horizontal confocal KB40 1 images
    P7 Sagittal brightfield KB40 11 images
    P7 Sagittal confocal KB40 7 images
    E15.5 Horizontal brightfield KB40 2 images
    E15.5 Horizontal confocal KB40 2 images
    E15.5 Sagittal brightfield KB40 10 images
    E15.5 Sagittal confocal KB40 6 images

    BGEM Probe Related ISH images
    Gja1 3252

    Supporting literature:
    PubMed ID
    7555741
    1337483
    9062798


    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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