Structure Gene Symbol Age Orientation Objective Veracity Veracity Support
Cerebral cortex LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase Lfng P7 Sagittal 63X Confirmed
  • Matches In Situ Data
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    BX BAC Address marker
    BX1303 RP23-79H1 EGFP
    Other structures in this brain:GENSAT Brain Atlas, expression of gene Lfng in mouse age P7, confocal image
    CEX    		GENSAT Brain Atlas, expression of gene Lfng in mouse age P7, confocal image
    CEX    		GENSAT Brain Atlas, expression of gene Lfng in mouse age P7, confocal image
    MED
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  • Founder Line: HM340
  • See all MMRRC strains for : Lfng
  • Get this mouse from MMRRC: STOCK Tg(Lfng-EGFP)HM340Gsat/Mmucd: Details, Order
  • Get this BAC Clone from CHORI: BX1303
  • UCSC Genome Browser for this BAC Address: RP23-79H1
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  • Read gene expression annotations for this image
  • View other image sets for Lfng
    • GENSAT Mouse Brain Atlas, expression of gene Lfng in the Cerebral cortex of P7 mouse. approximately section 9, deep layers, frontal cortex
    approximately section 9, deep layers, frontal cortex
    Comment on this Gene:
    No postnatal expression literature found. The BAC expresses in glial cells, including Bergmann glial cells in cerebellum. The expression in dentate gyrus and cerebellum at P7 seems to match the in situ data (can not tell cell types from the in situ data). The array studies from Dr. Heintz_s lab indicate that Lfng is present in Bergmann glia microarray, but not in any of the neuronal microarray data. Additional staining in astrocytes across the brain is observed in P7 BAC data. The Adult BAC data is consistent with the in situ data. At E15-5, Lfng mRNA is prominently localized in VZ. The BAC expresses in proliferating cells in the VZ and postmitotic cells due to the stability of EGFP protein.

    Gene Expression Annotations for this image
    structureExpression LevelExpression PatternCell typesSubtypes
    Cerebral cortexmoderate to strong signalscattered
  • glial cell
  • astrocyte


    • Other image sets for Lfng
    age orientation Acquisition technique Founder Line Batch
    adult Horizontal brightfield HM340 3 images
    adult Horizontal confocal HM340 1 images
    adult Sagittal brightfield HM340 10 images
    adult Sagittal confocal HM340 5 images
    P7 Horizontal confocal HM340 2 images
    P7 Sagittal brightfield HM340 11 images
    P7 Sagittal brightfield HM340 3 images
    P7 Sagittal confocal HM340 3 images
    P7 Sagittal confocal HM340 4 images
    E15.5 Horizontal brightfield HM340 3 images
    E15.5 Horizontal confocal HM340 2 images
    E15.5 Sagittal brightfield HM340 10 images
    E15.5 Sagittal confocal HM340 10 images

    BGEM Probe Related ISH images
    Lfng 3001

    Supporting literature:
    PubMed ID
    10675782
    11426219


    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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