Structure Gene Symbol Age Orientation Objective Veracity Veracity Support
Cerebral cortex calcium channel, voltage-dependent, gamma subunit 5 Cacng5 P7 Sagittal 40X Confirmed
  • Multiple Lines Match
  • Matches In Situ Data
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    BX BAC Address marker
    BX1300 RP23-329L1 EGFP
    Other structures in this brain:GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    CER    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    CEX    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    MID    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    OLF    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    PON    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    PON1    		GENSAT Brain Atlas, expression of gene Cacng5 in mouse age P7, confocal image
    SEP
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  • Founder Line: HM259
  • Get this BAC Clone from CHORI: BX1300
  • UCSC Genome Browser for this BAC Address: RP23-329L1
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  • Read gene expression annotations for this image
  • View other image sets for Cacng5
    • GENSAT Mouse Brain Atlas, expression of gene Cacng5 in the Cerebral cortex of P7 mouse. approximately section 8/9, layer 1
    approximately section 8/9, layer 1
    Comment on this Gene:
    No CNS expression literature found. The cited paper reports that by RT-PCR, the gene is expressed in frontal cortex, hippocampus and cerebellum in human brain. The BAC data is reproducible and matches BGEM in situ data well. However, in adult cerebellum, Bergmann glia is primarily labeled in the BAC data instead of Purkinje neurons seen at P7. The adult in situ data from Allen confirms Bergmann glia expression.

    Gene Expression Annotations for this image
    structureExpression LevelExpression PatternCell typesSubtypes
    Cerebral cortexmoderate to strong signalregion-specific
  • neuron
  • interneuron


    • Other image sets for Cacng5
    age orientation Acquisition technique Founder Line Batch
    adult Horizontal brightfield HM259 3 images
    adult Sagittal brightfield HM259 10 images
    adult Sagittal confocal HM259 3 images
    P7 Sagittal brightfield HM259 11 images
    P7 Sagittal confocal HM259 7 images
    E15.5 Horizontal brightfield HM259 3 images
    E15.5 Sagittal confocal HM259 1 images

    BGEM Probe Related ISH images
    Cacng5 1884

    Supporting literature:
    PubMed ID
    11170751


    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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