Section Gene Symbol Age Orientation Objective Veracity Veracity Support 07 visinin-like 1 Vsnl1 P7 Sagittal 10X Confirmed Matches In Situ Data Supported by Literature

BX BAC Address marker BX1449 RP23-120N8 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 11 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: HT4 See all MMRRC strains for : Vsnl1 Get this mouse from MMRRC: STOCK Tg(Vsnl1-EGFP)HT4Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX1449 UCSC Genome Browser for this BAC Address: RP23-120N8

Read gene expression annotations for this image View other image sets for Vsnl1

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Comment on this Gene: Limited expression literature. The BAC data matches BGEM in situ data and the literature. In adult cerebellum, the BAC expresses in neurons in the molecular layer, which is not obvious in the in situ data.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory Bulb	moderate to strong signal	region-specific and scattered	neuron
Cerebral cortex	moderate to strong signal	widely expressed	neuron
Hippocampus	moderate to strong signal	region-specific and scattered	neuron
Caudate Putamen	moderate to strong signal	scattered	neuron
Ventral striatum	moderate to strong signal	scattered	neuron
Basal Forebrain	moderate to strong signal	scattered	neuron
Thalamus	moderate to strong signal	region-specific and scattered	not clear	fibers
Hypothalamus	moderate to strong signal	region-specific and scattered	neuron
Midbrain	moderate to strong signal	region-specific and scattered	neuron
Pons	moderate to strong signal	widely expressed	neuron
Medulla	moderate to strong signal	widely expressed	neuron
Cerebellum	moderate to strong signal	region-specific	neuron

Other image sets for Vsnl1

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	HT4	3 images
adult	Sagittal	brightfield	HT4	10 images
adult	Sagittal	confocal	HT4	4 images
P7	Horizontal	brightfield	HT4	3 images
P7	Sagittal	brightfield	HT4	11 images
P7	Sagittal	confocal	HT4	10 images
E15.5	Horizontal	brightfield	HT4	3 images
E15.5	Sagittal	brightfield	HT4	10 images

BGEM Probe	Related ISH images
Vsnl1	1114

Supporting literature:

PubMed ID
12681369
12445467
10851344

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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