Section Gene Symbol Age Orientation Objective Veracity Veracity Support 10 protein tyrosine phosphatase, receptor type, F Ptprf P7 Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data

BX BAC Address marker BX1042 RP23-263G13 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 11 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: GD171 See all MMRRC strains for : Ptprf Get this mouse from MMRRC: STOCK Tg(Ptprf-EGFP)GD171Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX1042 UCSC Genome Browser for this BAC Address: RP23-263G13

Read gene expression annotations for this image View other image sets for Ptprf

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Comment on this Gene: No detailed expression literature found. Three BAC lines have very similar expression at P7. The BAC data grossly matches BGEM in situ data. At E15-5, the in situ data shows higher expression in the VZ, whereas the BAC data shows higher expression in the postmitotic cells due to the stability of EGFP protein.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory Bulb	moderate to strong signal	widely expressed	neuron
Cerebral cortex	moderate to strong signal	widely expressed	neuron
Septum	moderate to strong signal	region-specific	neuron
Ventral striatum	moderate to strong signal	region-specific	neuron
Thalamus	moderate to strong signal	region-specific and scattered	neuron	fibers
Hypothalamus	moderate to strong signal	region-specific	neuron
Midbrain	moderate to strong signal	region-specific	neuron
Pons	moderate to strong signal	region-specific	neuron	fibers
Medulla	moderate to strong signal	region-specific	neuron	fibers
Cerebellum	moderate to strong signal	region-specific	neuron	fibers

Other image sets for Ptprf

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	GD171	3 images
adult	Sagittal	brightfield	GD171	10 images
P7	Horizontal	brightfield	GD171	3 images
P7	Sagittal	brightfield	GD171	11 images
E15.5	Sagittal	brightfield	GD171	10 images
E15.5	Sagittal	brightfield	GD171	3 images

BGEM Probe	Related ISH images
Ptprf	1363

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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