Section Gene Symbol Age Orientation Objective Veracity Veracity Support 02 apolipoprotein D Apod E15.5 Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data Supported by Literature

BX BAC Address marker BX990 RP23-351M15 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: GN316 See all MMRRC strains for : Apod Get this mouse from MMRRC: STOCK Tg(Apod-EGFP)GN316Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX990 UCSC Genome Browser for this BAC Address: RP23-351M15

Read gene expression annotations for this image View other image sets for Apod

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Comment on this Gene: Three BAC lines have identical expression at P7. The overall expression patterns observed in the BAC mice are consistent with the literature and BGEM in situ data. It can not be determined the cell types of Apod positive cells inside the CNS from BGEM data.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Cerebral cortex	weak signal	scattered
Hippocampus	weak signal	scattered
Caudate Putamen	weak signal	scattered
Amygdala	weak signal	scattered
Cerebellum	weak signal	scattered

Other image sets for Apod

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	GN316	3 images
adult	Horizontal	confocal	GN316	1 images
adult	Sagittal	brightfield	GN316	10 images
adult	Sagittal	confocal	GN316	3 images
P7	Horizontal	brightfield	GN316	3 images
P7	Horizontal	confocal	GN316	1 images
P7	Sagittal	brightfield	GN316	11 images
P7	Sagittal	confocal	GN316	2 images
E15.5	Horizontal	brightfield	GN316	3 images
E15.5	Horizontal	confocal	GN316	1 images
E15.5	Sagittal	brightfield	GN316	10 images
E15.5	Sagittal	confocal	GN316	4 images

BGEM Probe	Related ISH images
Apod	650
Apod	1108

Supporting literature:

PubMed ID
11744388
2373967
14500696

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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