Section Gene Symbol Age Orientation Objective Veracity Veracity Support 06 early B cell factor 2 Ebf2 E15.5 Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data Supported by Literature

BX BAC Address marker BX961 RP24-283N8 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: FB58 See all MMRRC strains for : Ebf2 Get this mouse from MMRRC: STOCK Tg(Ebf2-EGFP)FB58Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX961 UCSC Genome Browser for this BAC Address: RP24-283N8

Read gene expression annotations for this image View other image sets for Ebf2

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Comment on this Gene: Two BAC lines have matching expression at P7. Confirmed expression sites include cerebellum, midbrain, dorsal spinal cord, glomerular layer of MOB, hippocampus and amygdala. The BAC detects extra expression sites such as cortex and hypothalamus. In adult BAC mice, the dorsal spinal cord is not as prominently stained as the in situ data shows.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory epithelium	moderate to strong signal	region-specific
Olfactory Bulb	moderate to strong signal	region-specific
Cerebral cortex	weak signal	region-specific
Septum	weak signal	region-specific
Thalamus	moderate to strong signal	region-specific
Hypothalamus	moderate to strong signal	region-specific
Midbrain	moderate to strong signal	region-specific
Pons+Medulla	moderate to strong signal	region-specific
Cerebellum	moderate to strong signal	region-specific

Other image sets for Ebf2

age	orientation	Acquisition technique	Founder Line	Batch
adult	Sagittal	brightfield	FB58	10 images
adult	Sagittal	confocal	FB58	2 images
P7	Horizontal	brightfield	FB58	3 images
P7	Horizontal	confocal	FB58	1 images
P7	Sagittal	brightfield	FB58	11 images
P7	Sagittal	confocal	FB58	6 images
E15.5	Horizontal	brightfield	FB58	3 images
E15.5	Horizontal	confocal	FB58	2 images
E15.5	Horizontal	confocal	FB58	1 images
E15.5	Sagittal	brightfield	FB58	10 images
E15.5	Sagittal	confocal	FB58	3 images

BGEM Probe	Related ISH images
Ebf2	1006

Supporting literature:

PubMed ID
9211912
9389446
11498051
14993187

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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