Section Gene Symbol Age Orientation Objective Veracity Veracity Support 10 calcitonin/calcitonin-related polypeptide, alpha Calca E15.5 Sagittal 10X Confirmed Multiple Lines Match Supported by Literature

BX BAC Address marker BX980 RP23-181A2 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 (thumbnails not to scale)

Double-click anywhere in the image below. Trouble? Visit help page.

Add this image to your album Download this image at the scale shown below. Founder Line: FG104 See all MMRRC strains for : Calca Get this mouse from MMRRC: STOCK Tg(Calca-EGFP)FG104Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX980 UCSC Genome Browser for this BAC Address: RP23-181A2

Read gene expression annotations for this image View other image sets for Calca

Detail Scale: 1:1 1:2 1:4 1:8 Hide atlas image Cosmetic edits were introduced to improve the presentation of this image (for example to repair rips, tears, and bubbles). To view edits, click here.

Instructions Click once, somewhere in the image. A new window will pop up displaying selected detail. There is no need to double click. If you change detail scale, new detail will load automatically.

Comment on this Gene: The BAC data is consistent with the literature. Correct expression is observed in brainstem, hypothalamus, thalamus and spinal motor neurons. Other expression sites in the BAC data are reproducible. BGEM in situ data shows no specific expression at any ages checked

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory Bulb	weak signal	region-specific
Cerebral cortex	moderate to strong signal	region-specific
Septum	undetectable	ND
Thalamus	moderate to strong signal	region-specific
Hypothalamus	moderate to strong signal	region-specific
Midbrain	moderate to strong signal	region-specific
Pons+Medulla	moderate to strong signal	region-specific
Cerebellum	moderate to strong signal	region-specific

Other image sets for Calca

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	FG104	3 images
adult	Horizontal	confocal	FG104	1 images
adult	Sagittal	brightfield	FG104	10 images
adult	Sagittal	confocal	FG104	7 images
adult	Sagittal	confocal	FG104	3 images
P7	Horizontal	brightfield	FG104	3 images
P7	Horizontal	confocal	FG104	2 images
P7	Sagittal	brightfield	FG104	11 images
P7	Sagittal	confocal	FG104	12 images
P7	Sagittal	confocal	FG104	2 images
E15.5	Horizontal	brightfield	FG104	3 images
E15.5	Sagittal	brightfield	FG104	10 images

BGEM Probe	Related ISH images
Calca	2572

Supporting literature:

PubMed ID
7697380
8986881
1637098
2785250

---

Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

Top

00:00:01.463