Section Gene Symbol Age Orientation Objective Veracity Veracity Support 05 neurogenic differentiation 4 Neurod4 P7 Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data Supported by Literature

BX BAC Address marker BX105 RP23-55O18 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 11 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: EU70 See all MMRRC strains for : Neurod4 Get this mouse from MMRRC: STOCK Tg(Neurod4-EGFP)EU70Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX105 UCSC Genome Browser for this BAC Address: RP23-55O18

Read gene expression annotations for this image View other image sets for Neurod4

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Comment on this Gene: The BAC data is reproducible and is consistent with both the literature and BGEM in situ data. However, at E15-5 in developing cerebral cortex, our BAC shows expression mainly in the intermediate zone rather than the VZ as indicated by the literature and BGEM data. This is probably due to the stability of EGFP reporter protein.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Cerebral cortex	undetectable	ND
Piriform cortex	weak signal	region-specific	neuron
Hippocampus	moderate to strong signal	region-specific	neuron	granule neuron of hippocampus fibers
Caudate Putamen	undetectable	ND
Ventral striatum	weak signal	scattered		fibers
Amygdala	weak signal	region-specific	neuron
Thalamus	moderate to strong signal	region-specific	neuron	fibers
Midbrain	moderate to strong signal	region-specific	neuron	fibers
Pons	moderate to strong signal	region-specific	neuron	fibers
Medulla	moderate to strong signal	region-specific	neuron	fibers
Cerebellum	moderate to strong signal	region-specific	neuron	granule neuron of cerebellum

Other image sets for Neurod4

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	EU70	3 images
adult	Sagittal	brightfield	EU70	10 images
adult	Sagittal	confocal	EU70	2 images
P7	Horizontal	brightfield	EU70	3 images
P7	Sagittal	brightfield	EU70	11 images
P7	Sagittal	confocal	EU70	4 images
E15.5	Horizontal	brightfield	EU70	3 images
E15.5	Horizontal	confocal	EU70	1 images
E15.5	Sagittal	brightfield	EU70	11 images
E15.5	Sagittal	confocal	EU70	4 images

BGEM Probe	Related ISH images
Neurod4	1153

Supporting literature:

PubMed ID
15105417
9029157

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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