Section Gene Symbol Age Orientation Objective Veracity Veracity Support 07 5-hydroxytryptamine (serotonin) receptor 2A Htr2a adult Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data Supported by Literature

BX BAC Address marker BX724 RP23-333H11 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 (thumbnails not to scale)

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Add this image to your album Download this image at the scale shown below. Founder Line: DQ118 See all MMRRC strains for : Htr2a Get this mouse from MMRRC: STOCK Tg(Htr2a-EGFP)DQ118Gsat/Mmucd: Details, Order Get this BAC Clone from CHORI: BX724 UCSC Genome Browser for this BAC Address: RP23-333H11

Read gene expression annotations for this image View other image sets for Htr2a

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Comment on this Gene: Two BAC lines have identical expression at P7. The BAC data is consistent with the literature and BGEM in situ data in general. The BAC expresses in thalamus at P7, which is not obvious in the in situ data.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory Bulb	undetectable	ND
Cerebral cortex	moderate to strong signal	region-specific and scattered	neuron
Hippocampus	undetectable	ND
Caudate Putamen	weak signal	scattered		fibers
Ventral striatum	undetectable	ND
Basal Forebrain	undetectable	ND
Thalamus	moderate to strong signal	region-specific and scattered	neuron	fibers
Midbrain	moderate to strong signal	region-specific	neuron
Substantia Nigra	undetectable	ND
Pons	moderate to strong signal	region-specific	neuron	fibers
Medulla	moderate to strong signal	region-specific	neuron	fibers
Cerebellum	weak signal	region-specific	neuron
other: Pretectal nucleus	moderate to strong signal	widely expressed	neuron

Other image sets for Htr2a

age	orientation	Acquisition technique	Founder Line	Batch
adult	Coronal	brightfield	KM207	57 images
adult	Horizontal	brightfield	DQ118	3 images
adult	Sagittal	brightfield	DQ118	10 images
P7	Horizontal	brightfield	DQ118	3 images
P7	Sagittal	brightfield	DQ118	11 images
P7	Sagittal	confocal	DQ118	1 images
E15.5	Horizontal	brightfield	DQ118	3 images
E15.5	Sagittal	brightfield	DQ118	10 images

BGEM Probe	Related ISH images
Htr2a	1842

Supporting literature:

PubMed ID
8028479
10462127
7796165

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Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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