Section Gene Symbol Age Orientation Objective Veracity Veracity Support
C 5-hydroxytryptamine (serotonin) receptor 2A Htr2a adult Horizontal 10X Confirmed
  • Multiple Lines Match
  • Matches In Situ Data
  • Supported by Literature
  • BX BAC Address marker
    BX724 RP23-333H11 EGFP

    Other cross-sections of this brain:GENSAT Brain Atlas, expression of gene Htr2a in mouse age adult, brightfield image
    C
    GENSAT Brain Atlas, expression of gene Htr2a in mouse age adult, brightfield image
    L
    GENSAT Brain Atlas, expression of gene Htr2a in mouse age adult, brightfield image
    T
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  • Founder Line: DQ118
  • See all MMRRC strains for : Htr2a
  • Get this mouse from MMRRC: STOCK Tg(Htr2a-EGFP)DQ118Gsat/Mmucd: Details, Order
  • Get this BAC Clone from CHORI: BX724
  • UCSC Genome Browser for this BAC Address: RP23-333H11
  • Read gene expression annotations for this image
  • View other image sets for Htr2a
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    Comment on this Gene:
    Two BAC lines have identical expression at P7. The BAC data is consistent with the literature and BGEM in situ data in general. The BAC expresses in thalamus at P7, which is not obvious in the in situ data.

    Gene Expression Annotations for this image
    structureExpression LevelExpression PatternCell typesSubtypes
    Dorsal Hornmoderate to strong signalregion-specific and scattered
  • neuron
  • Ventral Hornweak signalregion-specific and scattered
  • neuron
  • motor neuron
  • other


  • Other image sets for Htr2a
    age orientation Acquisition technique Founder Line Batch
    adult Coronal brightfield KM207 57 images
    adult Horizontal brightfield DQ118 3 images
    adult Sagittal brightfield DQ118 10 images
    P7 Horizontal brightfield DQ118 3 images
    P7 Sagittal brightfield DQ118 11 images
    P7 Sagittal confocal DQ118 1 images
    E15.5 Horizontal brightfield DQ118 3 images
    E15.5 Sagittal brightfield DQ118 10 images

    BGEM Probe Related ISH images
    Htr2a 1842

    Supporting literature:
    PubMed ID
    8028479
    10462127
    7796165



    Veracity definition
    Confirmed Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
    To Be Confirmed To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
    Anomalous Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

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