Section Gene Symbol Age Orientation Objective Veracity Veracity Support 07 seizure related gene 6 Sez6 adult Sagittal 10X Confirmed Multiple Lines Match Matches In Situ Data Supported by Literature

BX BAC Address marker BX275 RP23-205D6 EGFP

Other cross-sections of this brain: 01 02 03 04 05 06 07 08 09 10 (thumbnails not to scale)

Double-click anywhere in the image below. Trouble? Visit help page.

Add this image to your album Download this image at the scale shown below. Download this image at full resolution (courtesy NCBI) Founder Line: EF110 See all MMRRC strains for : Sez6 Get this mouse from MMRRC: STOCK Tg(Sez6-EGFP)EF110Gsat: Details, Order Get this BAC Clone from CHORI: BX275

Read gene expression annotations for this image View other image sets for Sez6

You need a Java enabled browser. Hide atlas image

Instructions Choose a Detail Scale (smaller rectangles load faster) Click somewhere in the image. Click the "submit" button, to view detail (or double click on the image). Detail will be displayed in a new window.

Comment on this Gene: The BAC data is reproducible and matches the literature and BGEM in situ data in general.

Gene Expression Annotations for this image

structure	Expression Level	Expression Pattern	Cell types	Subtypes
Olfactory Bulb	moderate to strong signal	region-specific	neuron	granule cell of MOB periglomerular cell of MOB
Cerebral cortex	moderate to strong signal	region-specific and scattered	neuron	interneuron pyramidal cell
Hippocampus	moderate to strong signal	region-specific	neuron	CA1 pyramidal cell
Caudate Putamen	weak signal	scattered	neuron
Ventral striatum	moderate to strong signal	scattered	neuron
Basal Forebrain	moderate to strong signal	scattered	neuron
Thalamus	moderate to strong signal	region-specific	neuron
Hypothalamus	moderate to strong signal	region-specific	neuron
Midbrain	moderate to strong signal	region-specific	neuron
Substantia Nigra	moderate to strong signal	scattered	neuron
Pons	moderate to strong signal	region-specific	neuron	fibers
Medulla	moderate to strong signal	region-specific	neuron	fibers
Cerebellum	moderate to strong signal	region-specific	neuron	interneuron

Other image sets for Sez6

age	orientation	Acquisition technique	Founder Line	Batch
adult	Horizontal	brightfield	EF110	3 images
adult	Sagittal	brightfield	EF110	10 images
adult	Sagittal	confocal	EF110	5 images
P7	Sagittal	brightfield	EF110	11 images
P7	Sagittal	confocal	EF110	9 images
P7	Sagittal	confocal	EF110	3 images
P7	Sagittal	confocal	EF110	1 images
E15.5	Horizontal	brightfield	EF110	3 images
E15.5	Sagittal	brightfield	EF110	10 images

BGEM Probe	Related ISH images
Sez6	406

Supporting literature:

PubMed ID
9073173
12351182

---

Veracity	definition
Confirmed	Confirmed refers to genes in which multiple lines yield matching datasets that agree with the available literature, or in which a single line has been produced that matches the available literature. In those cases where there a discrepancy between the literature and the reporter gene data (missing or additional sites of expression), this is noted in the database.
To Be Confirmed	To be confirmed refers to genes in which multiple lines produce matching datasets, but for which no independent expression data is available.
Anomalous	Anomalous refers to data collected from BAC reporter constructs producing different expression patterns in different lines (i.e. position effects).

Top

00:00:01.016