Cre mice grouped by gene. (251 Cre lines of which 239 have images.)

In collaboration with the Intramural Program of the National Institute of Mental Health (PI: Dr. Charles Gerfen), GENSAT offers transgenic BAC-Cre recombinase driver lines that allow for cell-specific gene manipulations in the central nervous system of the mouse. The aim of this project is to provide the scientific community with Cre driver lines that will target selected neuronal or glial populations in the brain and spinal cord.

Gong S, Doughty M, Harbaugh CR, Cummins A, Hatten ME, Heintz N, Gerfen CR (2007) Targeting CRE recombinase to specific neuron populations with Bacterial Artificial Chromosome constructs Journal of Neuroscience 27:9817-9823. (PMID: 17855595). Additional characterization of BAC-Cre driver lines, including axonal tracing data is provided at: http://genebrainsystems.nimh.nih.gov/

Click on a thumbnail to see all images for a particular gene and founder line. Or visit the Cre Production Summary.
Gene SymbolGeneFounder LineMarkerCre recombination pattern
reflects the brain regions/cell types detected as a result of cumulative actions of Cre recombinase at a Rosa26 reporter gene during the entire course of development. Brief comments only describe the predominant pattern of Cre recombination found in each line.
ViewOrder from MMRRC
A230065H16RikRIKEN cDNA A230065H16 geneRA31-CRECre Transgenic Cre mouse, A230065H16Rik geneSTOCK Tg(A230065H16Rik-cre)RA31Gsat/Mmucd: Details, Order
A230065H16RikRIKEN cDNA A230065H16 geneRA13-CRECre Transgenic Cre mouse, A230065H16Rik geneSTOCK Tg(A230065H16Rik-cre)RA13Gsat/Mmucd: Details, Order
A830010M20RikRIKEN cDNA A830010M20 geneKJ227CreCEREBRAL CORTEX: layer 5 subset
HABENULA: medial habenula
Transgenic Cre mouse, A830010M20Rik geneSTOCK Tg(A830010M20Rik-cre)KJ227Gsat/Mmucd: Details, Order
Adora2aadenosine A2a receptorKG139CreSTRIATUM: indirect pathway (striatopallidal, Drd2) specific Transgenic Cre mouse, Adora2a geneSTOCK Tg(Adora2a-cre)KG139Gsat/Mmucd: Details, Order
Adora2aadenosine A2a receptorKG139
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Adora2a-cre)KG139Gsat/Mmucd: Details, Order
Adora2aadenosine A2a receptorKG126CreSTRIATUM: indirect pathway (striatopallidal, Drd2) specific Transgenic Cre mouse, Adora2a geneSTOCK Tg(Adora2a-cre)KG126Gsat/Mmucd: Details, Order
Aldh1l1aldehyde dehydrogenase 1 family, member L1PB1-CRECre Transgenic Cre mouse, Aldh1l1 geneSTOCK Tg(Aldh1l1-cre)PB1Gsat/Mmucd: Details, Order
Amigo1adhesion molecule with Ig like domain 1NP231-CRECre Transgenic Cre mouse, Amigo1 geneNA
Amigo1adhesion molecule with Ig like domain 1NP210-CRECre Transgenic Cre mouse, Amigo1 geneSTOCK Tg(Amigo1-cre)NP210Gsat/Mmucd: Details, Order
Arcactivity regulated cytoskeletal-associated proteinRA54-CRECre Transgenic Cre mouse, Arc geneNA
Arhgef6Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6NL189-CRECre Transgenic Cre mouse, Arhgef6 geneSTOCK Tg(Arhgef6-cre)NL189Gsat/Mmucd: Details, Order
Arpp21cyclic AMP-regulated phosphoprotein, 21OL90-CRECre Transgenic Cre mouse, Arpp21 geneSTOCK Tg(Arpp21-cre)OL90Gsat/Mmucd: Details, Order
Ascl1achaete-scute complex homolog 1 (Drosophila)ND216-CRECreCEREBRAL CORTEX: scattered possible interneurons
HIPPOCAMPUS: scattered interneurons, dentate granule cells
BRAINSTEM: scattered various nuclei
Transgenic Cre mouse, Ascl1 geneSTOCK Tg(Ascl1-cre)ND216Gsat/Mmucd: Details, Order
Avparginine vasopressinQZ27-CRECre Transgenic Cre mouse, Avp geneSTOCK Tg(Avp-cre)QZ27Gsat/Mmucd: Details, Order
Avparginine vasopressinQZ20-CRECre Transgenic Cre mouse, Avp geneSTOCK Tg(Avp-cre)QZ20Gsat/Mmucd: Details, Order
Bsxbrain specific homeoboxNS106-CRECre Transgenic Cre mouse, Bsx geneSTOCK Tg(Bsx-cre)NS106Gsat/Mmucd: Details, Order
Bsxbrain specific homeoboxNS92-CRECre Transgenic Cre mouse, Bsx geneSTOCK Tg(Bsx-cre)NS92Gsat/Mmucd: Details, Order
CartptCART prepropeptideRY16-CRECre Transgenic Cre mouse, Cartpt geneSTOCK Tg(Cartpt-cre)RY16Gsat/Mmucd: Details, Order
Cbln4cerebellin 4 precursor proteinSN7-CRECre Transgenic Cre mouse, Cbln4 geneSTOCK Tg(Cbln4-cre)SN7Gsat/Mmucd: Details, Order
Ccdc3coiled-coil domain containing 3PO33-CRECre Transgenic Cre mouse, Ccdc3 geneSTOCK Tg(Ccdc3-cre)PO33Gsat/Mmucd: Details, Order
Ccdc3coiled-coil domain containing 3PO34-CRECre Transgenic Cre mouse, Ccdc3 geneSTOCK Tg(Ccdc3-cre)PO34Gsat/Mmucd: Details, Order
Ccdc3coiled-coil domain containing 3PO24-CRECre Transgenic Cre mouse, Ccdc3 geneSTOCK Tg(Ccdc3-cre)PO24Gsat/Mmucd: Details, Order
Cdhr1cadherin-related family member 1KG66CreOLFACTORY BULB: mitral cells with projections to piriform cortex Transgenic Cre mouse, Cdhr1 geneSTOCK Tg(Cdhr1-cre)KG66Gsat/Mmucd: Details, Order
Cdhr1cadherin-related family member 1KG76Cre Transgenic Cre mouse, Cdhr1 geneSTOCK Tg(Cdhr1-cre)KG76Gsat/Mmucd: Details, Order
Chatcholine acetyltransferaseGM60CreCHOLINERGIC NEURONS: basal forebrain, cortex, striatum, motor neurons in midbrain, brainstem and spinal cord
NOTE: lines GM24 and GM60 have identical expression
Transgenic Cre mouse, Chat geneSTOCK Tg(Chat-cre)GM60Gsat/Mmucd: Details, Order
Chatcholine acetyltransferaseGM60
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Chat gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Chat-cre)GM60Gsat/Mmucd: Details, Order
Chatcholine acetyltransferaseGM53CreCHOLINERGIC NEURONS: restricted to motor neurons in mid brain, brain stem and spinal cord
NOTE: minimal forebrain expression
Transgenic Cre mouse, Chat geneSTOCK Tg(Chat-cre)GM53Gsat/Mmucd: Details, Order
Chatcholine acetyltransferaseGM53
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Chat gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Chat-cre)GM53Gsat/Mmucd: Details, Order
Chatcholine acetyltransferaseGM24CreCHOLINERGIC NEURONS: basal forebrain, cortex, striatum, motor neurons in midbrain, brainstem and spinal cord
NOTE: lines GM24 and GM60 have identical expression.
Transgenic Cre mouse, Chat geneSTOCK Tg(Chat-cre)GM24Gsat/Mmucd: Details, Order
Chrna2cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)OE25-CRECre Transgenic Cre mouse, Chrna2 geneSTOCK Tg(Chrna2-cre)OE25Gsat/Mmucd: Details, Order
Chrna2cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal)OE29-CRECre Transgenic Cre mouse, Chrna2 geneSTOCK Tg(Chrna2-cre)OE29Gsat/Mmucd: Details, Order
Chrna3cholinergic receptor, nicotinic, alpha polypeptide 3NO196-CRECre Transgenic Cre mouse, Chrna3 geneSTOCK Tg(Chrna3-cre)NO196Gsat/Mmucd: Details, Order
Chrna5cholinergic receptor, nicotinic, alpha polypeptide 5SN83-CRECre Transgenic Cre mouse, Chrna5 geneSTOCK Tg(Chrna5-cre)SN83Gsat/Mmucd: Details, Order
Chrna5cholinergic receptor, nicotinic, alpha polypeptide 5SN86-CRECre Transgenic Cre mouse, Chrna5 geneSTOCK Tg(Chrna5-cre)SN86Gsat/Mmucd: Details, Order
Chrna5cholinergic receptor, nicotinic, alpha polypeptide 5NP306-CRECre Transgenic Cre mouse, Chrna5 geneSTOCK Tg(Chrna5-cre)NP306Gsat/Mmucd: Details, Order
Chrna7cholinergic receptor, nicotinic, alpha polypeptide 7NP348-CRECre Transgenic Cre mouse, Chrna7 geneSTOCK Tg(Chrna7-cre)NP348Gsat/Mmucd: Details, Order
Chrna7cholinergic receptor, nicotinic, alpha polypeptide 7NP366-CRECre Transgenic Cre mouse, Chrna7 geneSTOCK Tg(Chrna7-cre)NP366Gsat/Mmucd: Details, Order
Chrnb3cholinergic receptor, nicotinic, beta polypeptide 3SM93-CRECre Transgenic Cre mouse, Chrnb3 geneSTOCK Tg(Chrnb3-cre)SM93Gsat/Mmucd: Details, Order
Chrnb4cholinergic receptor, nicotinic, beta polypeptide 4OL57-CRECre Transgenic Cre mouse, Chrnb4 geneSTOCK Tg(Chrnb4-cre)OL57Gsat/Mmucd: Details, Order
Cmtm5CKLF-like MARVEL transmembrane domain containing 5GM106Cre no images available
STOCK Tg(Cmtm5-cre)GM106Gsat/Mmucd: Details, Order *
Cnnm2cyclin M2KD18CreHABENULA: medial habenula
CEREBRAL CORTEX: layer 2-6
THALAMUS: scattered
BRAIN STEM: select nuclei
Transgenic Cre mouse, Cnnm2 geneSTOCK Tg(Cnnm2-cre)KD18Gsat/Mmucd: Details, Order
Cnr1cannabinoid receptor 1 (brain)RY75-CRECre Transgenic Cre mouse, Cnr1 geneSTOCK Tg(Cnr1-cre)RY75Gsat/Mmucd: Details, Order
Colgalt2collagen beta(1-O)galactosyltransferase 2NF107-CRECre Transgenic Cre mouse, Colgalt2 geneSTOCK Tg(Glt25d2-cre)NF107Gsat/Mmucd: Details, Order
CortcortistatinIM42CreSUBTHALAMIC NUCLEUS
VENTRAL MIDBRAIN: VTA, mammillary nucleus
BRAINSTEM: scattered nuclei
Transgenic Cre mouse, Cort geneSTOCK Tg(Cort-cre)IM42Gsat/Mmucd: Details, Order
Crhcorticotropin releasing hormoneKN282CreTHALAMUS: ventral nuclei
OLFACTORY SYSTEM: anterior olfactory nucleus,nucleus of lateral olfactory tract
HYPOTHALAMUS: mammillary and supramammillary nuclei
NOTE: partial endogenous gene expression pattern
Transgenic Cre mouse, Crh geneSTOCK Tg(Crh-cre)KN282Gsat/Mmucd: Details, Order
Crhcorticotropin releasing hormoneKN282
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Crh-cre)KN282Gsat/Mmucd: Details, Order
Crhr2corticotropin releasing hormone receptor 2RT30-CRECre Transgenic Cre mouse, Crhr2 geneSTOCK Tg(Crhr2-cre)RT30Gsat/Mmucd: Details, Order
Crymcrystallin, muRL89-CCREC-Cre Transgenic Cre mouse, Crym geneSTOCK Tg(Crym-Ncre, Crym-Ccre)RL89Gsat/Mmucd: Details, Order
Cx3cl1chemokine (C-X3-C motif) ligand 1RA63-CRECre Transgenic Cre mouse, Cx3cl1 geneNA
Cx3cr1chemokine (C-X3-C) receptor 1MW126-CRECreCEREBRAL CORTEX: layer 5
AMYGDALA: central and other nuclei
THALAMUS: intralaminar nuclei
HYPOTHALAMUS: multiple nuclei
SEPTAL NUCLEUS: medial
MIDBRAIN: superior colliculus and other nuclei
HINDBRAIN: multiple nuclei
Transgenic Cre mouse, Cx3cr1 geneSTOCK Tg(Cx3cr1-cre)MW126Gsat/Mmucd: Details, Order
Cxcl11chemokine (C-X-C motif) ligand 11KN257CreCEREBELLUM: granule cells
CEREBRAL CORTEX: restricted to piriform/amygdala area
Transgenic Cre mouse, Cxcl11 geneSTOCK Tg(Cxcl11-cre)KN257Gsat/Mmucd: Details, Order
D630045J12RikRIKEN cDNA D630045J12 geneSG2-CRECre Transgenic Cre mouse, D630045J12Rik geneSTOCK Tg(D630045J12Rik-cre)SG2Gsat/Mmucd: Details, Order
Dact2dapper homolog 2, antagonist of beta-catenin (xenopus)SJ48-CRECre Transgenic Cre mouse, Dact2 geneSTOCK Tg(Dact2-cre)SJ48Gsat/Mmucd: Details, Order
Dbhdopamine beta hydroxylaseKH210Cre Transgenic Cre mouse, Dbh geneSTOCK Tg(Dbh-cre)KH210Gsat/Mmucd: Details, Order
Dbhdopamine beta hydroxylaseKH212CreNORADRENERGIC NEURONS: locus coeruleus (sections p074,075), other noradrenergic brainstem nuclei Transgenic Cre mouse, Dbh geneSTOCK Tg(Dbh-cre)KH212Gsat/Mmucd: Details, Order
Dbhdopamine beta hydroxylaseKH212
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Dbh-cre)KH212Gsat/Mmucd: Details, Order
DbpD site albumin promoter binding proteinMN120-CRECreCEREBRAL CORTEX: layer 5, piriform and entorhinal cortex
HIPPOCAMPUS: scattered dentate granule cells
THALAMUS: scattered specific nuclei
HYPOTHALAMUS: scattered specific nuclei
MIDBRAIN: inferior colliculus and other nuclei
Transgenic Cre mouse, Dbp geneSTOCK Tg(Dbp-cre)MN120Gsat/Mmucd: Details, Order
Ddcdopa decarboxylaseSD56-CRECre Transgenic Cre mouse, Ddc geneSTOCK Tg(Ddc-cre)SD56Gsat/Mmucd: Details, Order
Dlg3discs, large homolog 3 (Drosophila)KG118CreHIPPOCAMPUS: most of CA2,3,4 little in CA1
BRAINSTEM: inferior olive
Transgenic Cre mouse, Dlg3 geneSTOCK Tg(Dlg3-cre)KG118Gsat/Mmucd: Details, Order
Dlx1distal-less homeobox 1RB27-CRECre Transgenic Cre mouse, Dlx1 geneSTOCK Tg(Dlx1-cre)RB27Gsat/Mmucd: Details, Order
Dlx2distal-less homeobox 2RB47-CRECre Transgenic Cre mouse, Dlx2 geneSTOCK Tg(Dlx2-cre)RB47Gsat/Mmucd: Details, Order
Dlx2distal-less homeobox 2RT20-CRECre Transgenic Cre mouse, Dlx2 geneSTOCK Tg(Dlx2-cre)RT20Gsat/Mmucd: Details, Order
Dlx5distal-less homeobox 5MO36-CRECreGABAergic FOREBRAIN NEURONS:
CEREBRAL CORTEX: interneurons
STRIATUM: spiny projection neurons
THALAMUS: reticular nucleus
Transgenic Cre mouse, Dlx5 geneSTOCK Tg(Dlx5-cre)MO36Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY266CreACCUMBENS: somewhat restricted to shell
STRIATUM: scattered in only a subset of striatonigral neurons
AMYGDALA: intercalated nucleus
NOTE: restricted to subset of endogenous Drd1a expression
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)EY266Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY266
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Drd1a gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Drd1a-cre)EY266Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AFK150CreSTRIATUM: direct pathway / striatonigral neurons
CEREBRAL CORTEX:layers 5-6
HYPOTHALMUS: select nuclei
MIDBRAIN: select nuclei
BRAINSTEM: select nuclei
NOTE: matches endogenous Drd1a expression throughout the brain
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)FK150Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AFK150
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Drd1a-cre)FK150Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY262CreSTRIATUM: direct pathway / striatonigral neurons
CEREBRAL CORTEX:layers 5-6
HYPOTHALMUS: select nuclei
MIDBRAIN: select nuclei
BRAINSTEM: select nuclei
NOTE: matches endogenous Drd1a expression throughout the brain
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)EY262Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY262
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Drd1a gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Drd1a-cre)EY262Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY242CreHYPOTHALAMUS: limited primarily to suprachiasmatic hypothalamic nucleus
STRIATUM: scattered dorsal neurons
NOTE: subset of Drd1a gene expression
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)EY242Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AFK164CreCEREBRAL CORTEX: restricted to layer 6b
MIDBRAIN: pretectal nuclei
NOTE: subset of Drd1a expressing neurons
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)FK164Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY217CreSTRIATUM: mostly dorsal in direct pathway / striatonigral neurons
CEREBRAL CORTEX: minimal labeling
HYPOTHALMUS: some limited expression
NOTE: restricted partial subset of Drd1a expression
Transgenic Cre mouse, Drd1a geneSTOCK Tg(Drd1a-cre)EY217Gsat/Mmucd: Details, Order
Drd1adopamine receptor D1AEY217
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Drd1a gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Drd1a-cre)EY217Gsat/Mmucd: Details, Order
Drd2dopamine receptor D2ER43CreSTRIATUM: indirect pathway ( striatopallidal / Drd2 ) neurons
HYPOTHALAMUS: scattered neurons
NOTE: restricted primarily to the striatal subset of the endogenous expression of Drd2
Transgenic Cre mouse, Drd2 geneSTOCK Tg(Drd2-cre)ER43Gsat/Mmucd: Details, Order
Drd2dopamine receptor D2ER43
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Drd2-cre)ER43Gsat/Mmucd: Details, Order
Drd2dopamine receptor D2ER44CreSTRIATUM: indirect pathway (striatopallidal / Drd2 ) projection neurons and cholinergic interneurons
CEREBRAL CORTEX: restricted expression primarily in limbic cortices
HYPOTHALAMUS: select nuclei
MIDBRAIN: dopamine neurons
NOTE: matches endogenous Drd2 expression throughout brain
Transgenic Cre mouse, Drd2 geneSTOCK Tg(Drd2-cre)ER44Gsat/Mmucd: Details, Order
Drd2dopamine receptor D2ER44
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Drd2 gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Drd2-cre)ER44Gsat/Mmucd: Details, Order
Drd3dopamine receptor D3KI196CreSTRIATUM: ventral and accumbens
CEREBRAL CORTEX: layer 2/3 somatosensory, entorhinal cortex
HIPPOCAMPUS
Transgenic Cre mouse, Drd3 geneSTOCK Tg(Drd3-cre)KI196Gsat/Mmucd: Details, Order
Drd3dopamine receptor D3KJ302CreSTRIATUM: ventral and accumbens
CEREBRAL CORTEX: layer 2/3 somatosensory, entorhinal cortex
HIPPOCAMPUS
Transgenic Cre mouse, Drd3 geneSTOCK Tg(Drd3-cre)KJ302Gsat/Mmucd: Details, Order
Drd3dopamine receptor D3KJ291CreSTRIATUM: ventral and accumbens
CEREBRAL CORTEX: layer 2/3 somatosensory, entorhinal cortex
HIPPOCAMPUS
NOTE: similar expression to KJ302
Transgenic Cre mouse, Drd3 geneSTOCK Tg(Drd3-cre)KJ291Gsat/Mmucd: Details, Order
Drd3dopamine receptor D3KI198CreHIPPOCAMPUS:most of rostral CA1 and Dentate Gyrus, sparse in CA2,3
NOTE: restricted subset of normal endogenous Drd3 expression
Transgenic Cre mouse, Drd3 geneSTOCK Tg(Drd3-cre)KI198Gsat/Mmucd: Details, Order
Ebf2early B cell factor 2NP183-CRECre Transgenic Cre mouse, Ebf2 geneSTOCK Tg(Ebf2-cre)NP183Gsat/Mmucd: Details, Order
Ednrbendothelin receptor type BNR24-CRECre Transgenic Cre mouse, Ednrb geneSTOCK Tg(Ednrb-cre)NR24Gsat/Mmucd: Details, Order
Efr3aEFR3 homolog A (S. cerevisiae)NO108-CRECre Transgenic Cre mouse, Efr3a geneSTOCK Tg(Efr3a-cre)NO108Gsat/Mmucd: Details, Order
Emp1epithelial membrane protein 1NP267-CRECre Transgenic Cre mouse, Emp1 geneSTOCK Tg(Emp1-cre)NP267Gsat/Mmucd: Details, Order
Eomeseomesodermin homolog (Xenopus laevis)SO41-CRECre Transgenic Cre mouse, Eomes geneSTOCK Tg(Eomes-cre)SO41Gsat/Mmucd: Details, Order
EpycepiphycanKR363Cre Transgenic Cre mouse, Epyc geneSTOCK Tg(Epyc-cre)KR363Gsat/Mmucd: Details, Order
Gabrr3gamma-aminobutyric acid (GABA) receptor, rho 3QM32-CRECre Transgenic Cre mouse, Gabrr3 geneSTOCK Tg(Gabrr3-cre)QM32Gsat/Mmucd: Details, Order
Gabrr3gamma-aminobutyric acid (GABA) receptor, rho 3KC112CreSTRIATUM: very restricted lateral region
HYPOTHALAMUS: multiple nuclei
SUBTHALAMIC NUCLEUS
MIDBRAIN: dorsal nuclei, superior colliculus BR>brainstem
Transgenic Cre mouse, Gabrr3 geneSTOCK Tg(Gabrr3-cre)KC112Gsat/Mmucd: Details, Order
GalgalaninKI87CreHYPOTHALAMUS: restricted to specific anterior and posterior nuclei
RETINA: ganglion cells
BRAINSTEM: locus coeruleus
Transgenic Cre mouse, Gal geneSTOCK Tg(Gal-cre)KI87Gsat/Mmucd: Details, Order
Galr3galanin receptor 3SU30-CRECre Transgenic Cre mouse, Galr3 geneSTOCK Tg(Galr3-cre)SU30Gsat/Mmucd: Details, Order
GckglucokinaseTG7-CRECre Transgenic Cre mouse, Gck geneSTOCK Tg(Gck-cre)TG7Gsat/Mmucd: Details, Order
Gcm2glial cells missing homolog 2 (Drosophila)OC103-CRECre Transgenic Cre mouse, Gcm2 geneNA
Gdf10growth differentiation factor 10OR10-CRECre Transgenic Cre mouse, Gdf10 geneSTOCK Tg(Gdf10-cre)OR10Gsat/Mmucd: Details, Order
Gfapglial fibrillary acidic proteinPK90-CRECre Transgenic Cre mouse, Gfap geneSTOCK Tg(Gfap-cre)PK90Gsat/Mmucd: Details, Order
Gng7guanine nucleotide binding protein (G protein), gamma 7KH71CreSTRIATUM: both direct (Drd1a) and indirect (Drd2) projection neurons
CEREBRAL CORTEX: scattered in layer 5
HIPPOCAMPUS: scattered CA1 and dentate granule cells
Transgenic Cre mouse, Gng7 geneSTOCK Tg(Gng7-cre)KH71Gsat/Mmucd: Details, Order
Gng7guanine nucleotide binding protein (G protein), gamma 7KH67CreSTRIATUM: both direct (Drd1a) and indirect (Drd2) projection neurons
CEREBRAL CORTEX: scattered in layer 5
HIPPOCAMPUS: scattered CA1 and dentate granule cells
Transgenic Cre mouse, Gng7 geneSTOCK Tg(Gng7-cre)KH67Gsat/Mmucd: Details, Order
Gpr26G protein-coupled receptor 26KO269Cre Transgenic Cre mouse, Gpr26 geneSTOCK Tg(Gpr26-cre)KO269Gsat/Mmucd: Details, Order
Gpr26G protein-coupled receptor 26KO273CreCEREBRAL CORTEX: primary somatosensory cortex, layer 4, scattered layer 5 Transgenic Cre mouse, Gpr26 geneSTOCK Tg(Gpr26-cre)KO273Gsat/Mmucd: Details, Order
Gpr26G protein-coupled receptor 26KO250CreCEREBRAL CORTEX: layer 5 of motor areas
HIPPOCAMPUS: rostral CA1
THALAMUS: posterior (motor) related nuclei
CEREBELLUM: select areas
Transgenic Cre mouse, Gpr26 geneSTOCK Tg(Gpr26-cre)KO250Gsat/Mmucd: Details, Order
Gpr88G-protein coupled receptor 88RX50-CRECre Transgenic Cre mouse, Gpr88 geneSTOCK Tg(Gpr88-cre)RX50Gsat/Mmucd: Details, Order
Grm2glutamate receptor, metabotropic 2MR89-CRECre Transgenic Cre mouse, Grm2 geneSTOCK Tg(Grm2-cre)MR89Gsat/Mmucd: Details, Order
Grm2glutamate receptor, metabotropic 2MR90-CRECreCEREBRAL CORTEX: frontal, motor, cingluate, piriform areas
HIPPOCAMPUS: dentate granule cells
THALAMUS: select nuclei including intralaminar
AMYGDALA: medial nuclei
MIDBRAIN: central grey and mammillary nuclei
Transgenic Cre mouse, Grm2 geneSTOCK Tg(Grm2-cre)MR90Gsat/Mmucd: Details, Order
Grpgastrin releasing peptideKH107CreHIPPOCAMPUS: pyramidal neurons in CA3 and ventral CA1
CEREBELLUM: restricted regions
BRAINSTEM:select nuclei
Transgenic Cre mouse, Grp geneSTOCK Tg(Grp-cre)KH107Gsat/Mmucd: Details, Order
Grpgastrin releasing peptideKH288CreCEREBRAL CORTEX: frontal cortical areas
THALAMUS: anterior and intralaminar nuclei
Transgenic Cre mouse, Grp geneSTOCK Tg(Grp-cre)KH288Gsat/Mmucd: Details, Order
Gsc2goosecoid homebox 2RD32-CRECre Transgenic Cre mouse, Gsc2 geneSTOCK Tg(Gsc2-cre)RD32Gsat/Mmucd: Details, Order
Hap1huntingtin-associated protein 1RE55-CRECre Transgenic Cre mouse, Hap1 geneSTOCK Tg(Hap1-cre)RE55Gsat/Mmucd: Details, Order
Hdchistidine decarboxylaseIM1CreHYPOTHALAMUS: tuberomammillary nucleus (TMN, coronal levels P53,54,55,56)
NOTE: TMN is the source of histamine projections to the forebrain
Transgenic Cre mouse, Hdc geneSTOCK Tg(Hdc-cre)IM1Gsat/Mmucd: Details, Order
Hdchistidine decarboxylaseIM4CreHYPOTHALAMUS: tuberomammillary nucleus (TMN, coronal levels P53,54,55,56)
NOTE: TMN is the source of histamine projections to the forebrain
IM4 is identical to IM1
no images available
STOCK Tg(Hdc-cre)IM4Gsat/Mmucd: Details, Order *
Hmx3H6 homeobox 3NM2-CRECreCEREBRAL CORTEX: scattered layer 2/3,5 pyramidal
HYPOTHALAMUS: specific nuclei
MIDBRAIN: scattered dorsal and ventral
BRAINSTEM: specific nuclei
Transgenic Cre mouse, Hmx3 geneSTOCK Tg(Hmx3-cre)NM2Gsat/Mmucd: Details, Order
Htr2a5-hydroxytryptamine (serotonin) receptor 2AKM208CreAMYGDALA: central nucleus
Transgenic Cre mouse, Htr2a geneSTOCK Tg(Htr2a-cre)KM208Gsat/Mmucd: Details, Order
Htr2a5-hydroxytryptamine (serotonin) receptor 2AKM207CreSEPTAL AREA: Lateral septal nuclei
CEREBRAL CORTEX: frontal cortical areas, partial layer 5 and 6b
THALAMUS: moderate labeling of select nuclei
AMYGDALA: medial nuclei
HYPOTHALAMUS: scattered nuclei
BRAINSTEM: select nuclei
Transgenic Cre mouse, Htr2a geneSTOCK Tg(Htr2a-cre)KM207Gsat/Mmucd: Details, Order
Htr2a5-hydroxytryptamine (serotonin) receptor 2AKM207
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Htr2a-cre)KM207Gsat/Mmucd: Details, Order
Htr3a5-hydroxytryptamine (serotonin) receptor 3ANO152-CRECre Transgenic Cre mouse, Htr3a geneSTOCK Tg(Htr3a-cre)NO152Gsat/Mmucd: Details, Order
Igf1insulin-like growth factor 1PY2-CRECre Transgenic Cre mouse, Igf1 geneSTOCK Tg(Igf1-cre)PY2Gsat/Mmucd: Details, Order
Kcnc1potassium voltage gated channel, Shaw-related subfamily, member 1MN94-CRECre Transgenic Cre mouse, Kcnc1 geneSTOCK Tg(Kcnc1-cre)MN94Gsat/Mmucd: Details, Order
Kcnc1potassium voltage gated channel, Shaw-related subfamily, member 1MN77-CRECre Transgenic Cre mouse, Kcnc1 geneSTOCK Tg(Kcnc1-cre)MN77Gsat/Mmucd: Details, Order
Kcnip2Kv channel-interacting protein 2OP11-CRECre Transgenic Cre mouse, Kcnip2 geneNA
KerakeratocanIM23CreHIPPOCAMPUS: caudal CA1 primarily Transgenic Cre mouse, Kera geneSTOCK Tg(Kera-cre)IM23Gsat/Mmucd: Details, Order
Klk8kallikrein related-peptidase 8NP157-CRECre Transgenic Cre mouse, Klk8 geneSTOCK Tg(Klk8-cre)NP157Gsat/Mmucd: Details, Order
Klk8kallikrein related-peptidase 8NP171-CRECre Transgenic Cre mouse, Klk8 geneSTOCK Tg(Klk8-cre)NP171Gsat/Mmucd: Details, Order
Lamp5lysosomal-associated membrane protein family, member 5SN25-CRECre Transgenic Cre mouse, Lamp5 geneSTOCK Tg(Lamp5-cre)SN25Gsat/Mmucd: Details, Order
Lrfn5leucine rich repeat and fibronectin type III domain containing 5RL37-CRECre Transgenic Cre mouse, Lrfn5 geneNA
Lypd1Ly6/Plaur domain containing 1SE5-CRECre Transgenic Cre mouse, Lypd1 geneSTOCK Tg(Lypd1-cre)SE5Gsat/Mmucd: Details, Order
Lypd1Ly6/Plaur domain containing 1NR149-CRECreHIPPOCAMPUS: CA1-4
ENTORHINAL CORTEX
SEPTAL AREA
ACCESSORY OLFACTORY NULCEI
MIDBRAIN: superior colliculus intermediate layers
BRAINSTEM: select nuclei (ie, trigeminal motor)
Transgenic Cre mouse, Lypd1 geneSTOCK Tg(Lypd1-cre)NR149Gsat/Mmucd: Details, Order
Lypd1Ly6/Plaur domain containing 1NR151-CRECreHIPPOCAMPUS: CA1, rostral levels, some CA4 Transgenic Cre mouse, Lypd1 geneNA
Lypd6LY6/PLAUR domain containing 6KL156CreTHALAMUS: intralaminar
HYPOTHALAMUS: various specific nuclei
MIDBRAIN: reticular nuclei
Transgenic Cre mouse, Lypd6 geneNA
Man1a2mannosidase, alpha, class 1A, member 2RE8-CRECre Transgenic Cre mouse, Man1a2 geneSTOCK Tg(Man1a2-cre)RE8Gsat/Mmucd: Details, Order
March4membrane-associated ring finger (C3HC4) 4OZ149-CRECre Transgenic Cre mouse, March4 geneSTOCK Tg(March4-cre)OZ149Gsat/Mmucd: Details, Order
Neurod1neurogenic differentiation 1RZ24-CRECre Transgenic Cre mouse, Neurod1 geneSTOCK Tg(Neurod1-cre)RZ24Gsat/Mmucd: Details, Order
Neurod4neurogenic differentiation 4OU98-CRECre Transgenic Cre mouse, Neurod4 geneSTOCK Tg(Neurod4-cre)OU98Gsat/Mmucd: Details, Order
Nmuneuromedin URJ32-CRECre Transgenic Cre mouse, Nmu geneSTOCK Tg(Nmu-cre)RJ32Gsat/Mmucd: Details, Order
Npyneuropeptide YRH28-CRECre Transgenic Cre mouse, Npy geneSTOCK Tg(Npy-cre)RH28Gsat/Mmucd: Details, Order
Npyneuropeptide YRH26-CRECre Transgenic Cre mouse, Npy geneSTOCK Tg(Npy-cre)RH26Gsat/Mmucd: Details, Order
Npy1rneuropeptide Y receptor Y1RL28-CRECre Transgenic Cre mouse, Npy1r geneSTOCK Tg(Npy1r-cre)RL28Gsat/Mmucd: Details, Order
Npy1rneuropeptide Y receptor Y1RL2-CRECre Transgenic Cre mouse, Npy1r geneSTOCK Tg(Npy1r-cre)RL2Gsat/Mmucd: Details, Order
Npy2rneuropeptide Y receptor Y2SM19-CRECre Transgenic Cre mouse, Npy2r geneSTOCK Tg(Npy2r-cre)SM19Gsat/Mmucd: Details, Order
Npy2rneuropeptide Y receptor Y2SM20-CRECre Transgenic Cre mouse, Npy2r geneSTOCK Tg(Npy2r-cre)SM20Gsat/Mmucd: Details, Order
Nr5a1nuclear receptor subfamily 5, group A, member 1SB15-CRECre Transgenic Cre mouse, Nr5a1 geneSTOCK Tg(Nr5a1-cre)SB15Gsat/Mmucd: Details, Order
Nr5a1nuclear receptor subfamily 5, group A, member 1SB4-CRECre Transgenic Cre mouse, Nr5a1 geneSTOCK Tg(Nr5a1-cre)SB4Gsat/Mmucd: Details, Order
NsmfNMDA receptor synaptonuclear signaling and neuronal migration factorNR133-CRECre Transgenic Cre mouse, Nsmf geneSTOCK Tg(Nelf-cre)NR133Gsat/Mmucd: Details, Order
NtsneurotensinRH4-CRECre Transgenic Cre mouse, Nts geneSTOCK Tg(Nts-cre)RH4Gsat/Mmucd: Details, Order
Ntsr1neurotensin receptor 1GN209CreCEREBRAL CORTEX: piriform cortex specific
MIDBRAIN: inferior colliculus
CEREBELLUM: stripes
Transgenic Cre mouse, Ntsr1 geneSTOCK Tg(Ntsr1-cre)GN209Gsat/Mmucd: Details, Order
Ntsr1neurotensin receptor 1GN220CreCEREBRAL CORTEX: neocortex layer 6, corticothalamic projections Transgenic Cre mouse, Ntsr1 geneSTOCK Tg(Ntsr1-cre)GN220Gsat/Mmucd: Details, Order
Ntsr1neurotensin receptor 1GN220
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Ntsr1 gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Ntsr1-cre)GN220Gsat/Mmucd: Details, Order
Opn4opsin 4 (melanopsin)SA9-CRECre Transgenic Cre mouse, Opn4 geneSTOCK Tg(Opn4-cre)SA9Gsat/Mmucd: Details, Order
Osbpl1aoxysterol binding protein-like 1AOW8-CRECre Transgenic Cre mouse, Osbpl1a geneSTOCK Tg(Osbpl1a-cre)OW8Gsat/Mmucd: Details, Order
Osbpl1aoxysterol binding protein-like 1AOW20-CRECre Transgenic Cre mouse, Osbpl1a geneSTOCK Tg(Osbpl1a-cre)OW20Gsat/Mmucd: Details, Order
Oxtroxytocin receptorON66-CRECre Transgenic Cre mouse, Oxtr geneSTOCK Tg(Oxtr-cre)ON66Gsat/Mmucd: Details, Order
Pcdh9protocadherin 9NP276-CRECre Transgenic Cre mouse, Pcdh9 geneSTOCK Tg(Pcdh9-cre)NP276Gsat/Mmucd: Details, Order
Pcp2Purkinje cell protein 2 (L7)GN137CreCerebellum: Purkinje cells
NOTE: matches endogenous gene expression
Transgenic Cre mouse, Pcp2 geneSTOCK Tg(Pcp2-cre)GN137Gsat/Mmucd: Details, Order
Pcp2Purkinje cell protein 2 (L7)GN135CreCEREBELLUM: Purkinje cells
NOTE: matches endogenous gene expression, identical to GN137
Transgenic Cre mouse, Pcp2 geneSTOCK Tg(Pcp2-cre)GN135Gsat/Mmucd: Details, Order
Pcp2Purkinje cell protein 2 (L7)GN135
(congenic C57BL/6J)
CreCEREBELLUM: Purkinje cells NOTE: matches endogenous gene expression Transgenic Cre mouse, Pcp2 gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Pcp2-cre)GN135Gsat/Mmucd: Details, Order
Pde1bphosphodiesterase 1B, Ca2+-calmodulin dependentOZ114-CRECre Transgenic Cre mouse, Pde1b geneSTOCK Tg(Pde1b-cre)OZ114Gsat/Mmucd: Details, Order
Pde1cphosphodiesterase 1CIT146CreCerebral cortex: piriform and olfactory related areas
Brainstem: pontine reticular complex, other select nuclei
Cerebellum: widespread labeling
Transgenic Cre mouse, Pde1c geneSTOCK Tg(Pde1c-cre)IT146Gsat/Mmucd: Details, Order
Pde1cphosphodiesterase 1CIT146
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Pde1c-cre)IT146Gsat/Mmucd: Details, Order
Pde1cphosphodiesterase 1CIT106CreBrainstem: pontine reticular complex, other select nuclei
Cerebellum: widespread labeling
Transgenic Cre mouse, Pde1c geneSTOCK Tg(Pde1c-cre)IT106Gsat/Mmucd: Details, Order
Pdzk1ip1PDZK1 interacting protein 1KD27CreMIDBRAIN: dorsal and ventral midbrain in select nuclei, including superior colliculus, substantia nigra and central grey nuclei Transgenic Cre mouse, Pdzk1ip1 geneSTOCK Tg(Pdzk1ip1-cre)KD27Gsat/Mmucd: Details, Order
Pdzk1ip1PDZK1 interacting protein 1KD31CreMIDBRAIN: dorsal and ventral midbrain in select nuclei, including superior colliculus, substantia nigra and central grey nuclei Transgenic Cre mouse, Pdzk1ip1 geneSTOCK Tg(Pdzk1ip1-cre)KD31Gsat/Mmucd: Details, Order
Pdzk1ip1PDZK1 interacting protein 1KD35CreMIDBRAIN: dorsal and ventral midbrain in select nuclei, including superior colliculus, substantia nigra and central grey nuclei Transgenic Cre mouse, Pdzk1ip1 geneNA
Phox2bpaired-like homeobox 2bNP91-CRECre Transgenic Cre mouse, Phox2b geneSTOCK Tg(Phox2b-cre)NP91Gsat/Mmucd: Details, Order
Phox2bpaired-like homeobox 2bNP110-CRECre Transgenic Cre mouse, Phox2b geneSTOCK Tg(Phox2b-cre)NP110Gsat/Mmucd: Details, Order
Plxnd1plexin D1OG1-CRECre Transgenic Cre mouse, Plxnd1 geneSTOCK Tg(Plxnd1-cre)OG1Gsat/Mmucd: Details, Order
Pmchpro-melanin-concentrating hormoneKY133CreHYPOTHALAMUS: restricted to nuclei producing Pmch Transgenic Cre mouse, Pmch geneSTOCK Tg(Pmch-cre)KY133Gsat/Mmucd: Details, Order
Ppp1r17protein phosphatase 1, regulatory subunit 17NL163-CRECre Transgenic Cre mouse, Ppp1r17 geneSTOCK Tg(Ppp1r17-cre)NL163Gsat/Mmucd: Details, Order
Ppp1r17protein phosphatase 1, regulatory subunit 17NL146-CRECre Transgenic Cre mouse, Ppp1r17 geneSTOCK Tg(Ppp1r17-cre)NL146Gsat/Mmucd: Details, Order
Prokr2prokineticin receptor 2MG17CreOLFACTORY BULB:extensive expression
STRIATUM: scattered neurons
AMYGDALA: select nuclei
HABENULA: lateral nucleus
THALAMUS: intralaminar nuclei
HYPOTHALAMUS: SCN and other nuclei MIDBRAIN: PAG
Transgenic Cre mouse, Prokr2 geneSTOCK Tg(Prokr2-cre)MG17Gsat/Mmucd: Details, Order
Prokr2prokineticin receptor 2MG32CreTHALAMUS: widespread dorsal nuclei
HABENULA: medial and lateral nuclei
CEREBRAL CORTEX: cingulate and scattered other areas
HIPPOCAMPUS: scattered pyramidal neurons
Transgenic Cre mouse, Prokr2 geneSTOCK Tg(Prokr2-cre)MG32Gsat/Mmucd: Details, Order
Prokr2prokineticin receptor 2MG22CreOLFACTORY BULB:extensive expression
THALAMUS: widespread in anterior and dorsal nuclei
HYPOTHALAMUS: SCN
Transgenic Cre mouse, Prokr2 geneSTOCK Tg(Prokr2-cre)MG22Gsat/Mmucd: Details, Order
Prokr2prokineticin receptor 2MG22
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Prokr2-cre)MG22Gsat/Mmucd: Details, Order
Prox1prospero-related homeobox 1SJ39-CRECre Transgenic Cre mouse, Prox1 geneSTOCK Tg(Prox1-cre)SJ39Gsat/Mmucd: Details, Order
Prox1prospero-related homeobox 1SJ32-CRECre Transgenic Cre mouse, Prox1 geneSTOCK Tg(Prox1-cre)SJ32Gsat/Mmucd: Details, Order
Prss12protease, serine, 12 neurotrypsin (motopsin)SP41-CRECre Transgenic Cre mouse, Prss12 geneSTOCK Tg(Prss12-cre)SP41Gsat/Mmucd: Details, Order
Prss12protease, serine, 12 neurotrypsin (motopsin)SP43-CRECre Transgenic Cre mouse, Prss12 geneSTOCK Tg(Prss12-cre)SP43Gsat/Mmucd: Details, Order
Ptger2prostaglandin E receptor 2 (subtype EP2)SC31-CRECre Transgenic Cre mouse, Ptger2 geneSTOCK Tg(Ptger2-cre)SC31Gsat/Mmucd: Details, Order
Ptger2prostaglandin E receptor 2 (subtype EP2)SC30-CRECre Transgenic Cre mouse, Ptger2 geneSTOCK Tg(Ptger2-cre)SC30Gsat/Mmucd: Details, Order
Ptprcprotein tyrosine phosphatase, receptor type, CNM130-CRECre Transgenic Cre mouse, Ptprc geneSTOCK Tg(Ptprc-cre)NM130Gsat/Mmucd: Details, Order
Ptprcprotein tyrosine phosphatase, receptor type, CNM127-CRECre Transgenic Cre mouse, Ptprc geneSTOCK Tg(Ptprc-cre)NM127Gsat/Mmucd: Details, Order
Rab39bRAB39B, member RAS oncogene familyTL73-CRECre Transgenic Cre mouse, Rab39b geneSTOCK Tg(Rab39b-cre)TL73Gsat/Mmucd: Details, Order
Rasgrp1RAS guanyl releasing protein 1PO14-CRECre Transgenic Cre mouse, Rasgrp1 geneSTOCK Tg(Rasgrp1-cre)PO14Gsat/Mmucd: Details, Order
Rasgrp1RAS guanyl releasing protein 1PO1-CRECre Transgenic Cre mouse, Rasgrp1 geneSTOCK Tg(Rasgrp1-cre)PO1Gsat/Mmucd: Details, Order
Raxretina and anterior neural fold homeoboxNL44-CRECre Transgenic Cre mouse, Rax geneSTOCK Tg(Rax-cre)NL44Gsat/Mmucd: Details, Order
Rbp1retinol binding protein 1, cellularMJ72-CRECre Transgenic Cre mouse, Rbp1 geneSTOCK Tg(Rbp1-cre)MJ72Gsat/Mmucd: Details, Order
Rbp4retinol binding protein 4, plasmaKL100CreCEREBRAL CORTEX: most of neocortex,layer 5 pyramidal tract neurons (and corticostriatal), piriform cortex
HIPPOCAMPUS: dentate granule cells
Transgenic Cre mouse, Rbp4 geneSTOCK Tg(Rbp4-cre)KL100Gsat/Mmucd: Details, Order
Rbp4retinol binding protein 4, plasmaKL105Cre Transgenic Cre mouse, Rbp4 geneSTOCK Tg(Rbp4-cre)KL105Gsat/Mmucd: Details, Order
Rcan2regulator of calcineurin 2ON50-CRECre Transgenic Cre mouse, Rcan2 geneSTOCK Tg(Rcan2-cre)ON50Gsat/Mmucd: Details, Order
Rgs14regulator of G-protein signaling 14SR63-CRECre Transgenic Cre mouse, Rgs14 geneSTOCK Tg(Rgs14-cre)SR63Gsat/Mmucd: Details, Order
Rgs8regulator of G-protein signaling 8OK14-CRECre Transgenic Cre mouse, Rgs8 geneSTOCK Tg(Rgs8-cre)OK14Gsat/Mmucd: Details, Order
Rxfp3relaxin family peptide receptor 3RS38-CRECre Transgenic Cre mouse, Rxfp3 geneSTOCK Tg(Rxfp3-cre)RS38Gsat/Mmucd: Details, Order
Satb2special AT-rich sequence binding protein 2MO23-CRECreCEREBRAL CORTEX: neocortex, layers 5 (pyramidal tract and corticostriatal) and 6 (corticothalamic) Transgenic Cre mouse, Satb2 geneSTOCK Tg(Satb2-cre)MO23Gsat/Mmucd: Details, Order
Satb2special AT-rich sequence binding protein 2MO18-CRECre Transgenic Cre mouse, Satb2 geneSTOCK Tg(Satb2-cre)MO18Gsat/Mmucd: Details, Order
Sema3esema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3EOX19-CRECre Transgenic Cre mouse, Sema3e geneSTOCK Tg(Sema3e-cre)OX19Gsat/Mmucd: Details, Order
Sema7asema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7ANO117-CRECre Transgenic Cre mouse, Sema7a geneSTOCK Tg(Sema7a-cre)NO117Gsat/Mmucd: Details, Order
Sept4septin 4OX54-CRECre Transgenic Cre mouse, Sept4 geneSTOCK Tg(Sept4-cre)OX54Gsat/Mmucd: Details, Order
Sepw1selenoprotein W, muscle 1NP39-CRECre Transgenic Cre mouse, Sepw1 geneSTOCK Tg(Sepw1-cre)NP39Gsat/Mmucd: Details, Order
Sepw1selenoprotein W, muscle 1NP72-CRECre Transgenic Cre mouse, Sepw1 geneSTOCK Tg(Sepw1-cre)NP72Gsat/Mmucd: Details, Order
ShfSrc homology 2 domain containing FSO5-CRECre Transgenic Cre mouse, Shf geneSTOCK Tg(Shf-cre)SO5Gsat/Mmucd: Details, Order
Sim1single-minded homolog 1 (Drosophila)KJ40Crehypothalamus: multiple nuclei, including PVN
Amygdala: medial nuclei, Nucleus Lateral Olfactory Tract Mammillary bodies: nuclei giving rise to mammillothalamic tract
Transgenic Cre mouse, Sim1 geneSTOCK Tg(Sim1-cre)KJ40Gsat/Mmucd: Details, Order
Sim1single-minded homolog 1 (Drosophila)KJ18Crehypothalamus: widespread in multiple nuclei including PVN
cortex: widespread scattered layer 5
amygdala: medial nuclei
Transgenic Cre mouse, Sim1 geneSTOCK Tg(Sim1-cre)KJ18Gsat/Mmucd: Details, Order
Sim1single-minded homolog 1 (Drosophila)KJ27Crehypothalamus: widespread in multiple nuclei including PVN
cortex: widespread scattered layer 3-5
amygdala: medial nuclei
Transgenic Cre mouse, Sim1 geneSTOCK Tg(Sim1-cre)KJ27Gsat/Mmucd: Details, Order
Sim1single-minded homolog 1 (Drosophila)KJ21Crehypothalamus: multiple nuclei, including PVN
Amygdala: medial nuclei, Nucleus Lateral Olfactory Tract
hippocampus: dorsal CA1
cerebral cortex: restricted part of entorhinal cortex
Transgenic Cre mouse, Sim1 geneSTOCK Tg(Sim1-cre)KJ21Gsat/Mmucd: Details, Order
Six6sine oculis-related homeobox 6TD40-CRECre Transgenic Cre mouse, Six6 geneSTOCK Tg(Six6-cre)TD40Gsat/Mmucd: Details, Order
Slasrc-like adaptorKJ319CreCereberal cortex: partial labeling of pyramidal neurons in layers 2-6 of neocortex
Cerebellum: granule cells
Transgenic Cre mouse, Sla geneSTOCK Tg(Sla-cre)KJ319Gsat/Mmucd: Details, Order
Slasrc-like adaptorKJ303Crecerebral cortex: supraganular layers of much of neocortex
nucleus of the lateral olfactory tract
Transgenic Cre mouse, Sla geneSTOCK Tg(Sla-cre)KJ303Gsat/Mmucd: Details, Order
Slc17a6solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6OX30-CRECre Transgenic Cre mouse, Slc17a6 geneSTOCK Tg(Slc17a6-cre)OX30Gsat/Mmucd: Details, Order
Slc17a6solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6OX23-CRECre Transgenic Cre mouse, Slc17a6 geneSTOCK Tg(Slc17a6-cre)OX23Gsat/Mmucd: Details, Order
Slc17a7solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7SA31-CRECre Transgenic Cre mouse, Slc17a7 geneSTOCK Tg(Slc17a7-cre)SA31Gsat/Mmucd: Details, Order
Slc18a2solute carrier family 18 (vesicular monoamine), member 2OZ13-CRECre Transgenic Cre mouse, Slc18a2 geneSTOCK Tg(Slc18a2-cre)OZ13Gsat/Mmucd: Details, Order
Slc18a2solute carrier family 18 (vesicular monoamine), member 2OZ27-CRECre Transgenic Cre mouse, Slc18a2 geneNA
Slc18a2solute carrier family 18 (vesicular monoamine), member 2OZ14-CRECre Transgenic Cre mouse, Slc18a2 geneSTOCK Tg(Slc18a2-cre)OZ14Gsat/Mmucd: Details, Order
Slc32a1solute carrier family 32 (GABA vesicular transporter), member 1RO29-CRECre Transgenic Cre mouse, Slc32a1 geneSTOCK Tg(Slc32a1-cre)RO29Gsat/Mmucd: Details, Order
Slc32a1solute carrier family 32 (GABA vesicular transporter), member 1RO32-CRECre Transgenic Cre mouse, Slc32a1 geneSTOCK Tg(Slc32a1-cre)RO32Gsat/Mmucd: Details, Order
Slc5a7solute carrier family 5 (choline transporter), member 7SW27-CRECre Transgenic Cre mouse, Slc5a7 geneNA
Slc6a3solute carrier family 6 (neurotransmitter transporter, dopamine), member 3SG56-CRECre Transgenic Cre mouse, Slc6a3 geneSTOCK Tg(Slc6a3-cre)SG56Gsat/Mmucd: Details, Order
Slc6a3solute carrier family 6 (neurotransmitter transporter, dopamine), member 3SG62-CRECre Transgenic Cre mouse, Slc6a3 geneSTOCK Tg(Slc6a3-cre)SG62Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4ET127Crematches adult (serotonin neurons) and developmental (neocortex layer 6) gene expression Transgenic Cre mouse, Slc6a4 geneSTOCK Tg(Slc6a4-cre)ET127Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4ET33Crematches adult gene expression (serotonin neurons and sparse numbers in cortex) Transgenic Cre mouse, Slc6a4 geneSTOCK Tg(Slc6a4-cre)ET33Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4ET33
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Slc6a4 gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Slc6a4-cre)ET33Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4EZ13Cre-ER
(inducible)
Inducible Cre expression in serotonin neurons. Tamoxifen (6-10 mg/kg, ip) injected 1-3 times in the adult induces Cre restricted to serotonin neurons (no apparent labeling in cortex) Transgenic Cre mouse, Slc6a4 geneSTOCK Tg(Slc6a4-cre/ERT2)EZ13Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4EZ13
(congenic C57BL/6J)
Cre-ER
(inducible)
Transgenic Cre mouse, Slc6a4 gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Slc6a4-cre/ERT2)EZ13Gsat/Mmucd: Details, Order
Slc6a4solute carrier family 6 (neurotransmitter transporter, serotonin), member 4EZ8Cre-ER
(inducible)
Inducible Cre expression in serotonin neurons. Tamoxifen (6-10 mg/kg, ip) injected 1-3 times in the adult induces Cre restricted to serotonin neurons (no apparent labeling in cortex) Transgenic Cre mouse, Slc6a4 geneSTOCK Tg(Slc6a4-cre/ERT2)EZ8Gsat/Mmucd: Details, Order
Slc6a5solute carrier family 6 (neurotransmitter transporter, glycine), member 5KF109Crevery specific expression in glycinergic neurons in brainstem Transgenic Cre mouse, Slc6a5 geneSTOCK Tg(Slc6a5-cre)KF109Gsat/Mmucd: Details, Order
Slc6a5solute carrier family 6 (neurotransmitter transporter, glycine), member 5KF109
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Slc6a5-cre)KF109Gsat/Mmucd: Details, Order
Slc6a5solute carrier family 6 (neurotransmitter transporter, glycine), member 5KF91Cre Transgenic Cre mouse, Slc6a5 geneSTOCK Tg(Slc6a5-cre)KF91Gsat/Mmucd: Details, Order
Syndig1lsynapse differentiation inducing 1 likeTD24-CRECre Transgenic Cre mouse, Syndig1l geneSTOCK Tg(Tmem90a-cre)TD24Gsat/Mmucd: Details, Order
Syndig1lsynapse differentiation inducing 1 likeTD15-CRECre Transgenic Cre mouse, Syndig1l geneSTOCK Tg(Tmem90a-cre)TD15Gsat/Mmucd: Details, Order
Syt17synaptotagmin XVIINO14-CRECreMIDBRAIN: specific labeling of VTA dopamine neurons Transgenic Cre mouse, Syt17 geneSTOCK Tg(Syt17-cre)NO14Gsat/Mmucd: Details, Order
Syt17synaptotagmin XVIINO14-CRE
(congenic C57BL/6J)
Cre no images availableB6.FVB(Cg)-Tg(Syt17-cre)NO14Gsat/Mmucd: Details, Order
Syt6synaptotagmin VIKI130Cre Transgenic Cre mouse, Syt6 geneSTOCK Tg(Syt6-cre)KI130Gsat/Mmucd: Details, Order
Syt6synaptotagmin VIKI148CreCerebral cortex: frontal,congulate and motor related areas, layer 6 thalamocortical neurons
Striatum: enriched in patches
thalamus: medial habenula neurons, terminals from cortex midbrain: scattered neurons, including SNr
cerebellum: widespread varied labeling
Transgenic Cre mouse, Syt6 geneSTOCK Tg(Syt6-cre)KI148Gsat/Mmucd: Details, Order
Syt6synaptotagmin VIKI109Cre Transgenic Cre mouse, Syt6 geneSTOCK Tg(Syt6-cre)KI109Gsat/Mmucd: Details, Order
Thtyrosine hydroxylaseFI12Crematches adult and developmental gene expression Transgenic Cre mouse, Th geneSTOCK Tg(Th-cre)FI12Gsat/Mmucd: Details, Order
Thtyrosine hydroxylaseFI172Crematches adult and developmental gene expression, identical to line FI12 Transgenic Cre mouse, Th geneSTOCK Tg(Th-cre)FI172Gsat/Mmucd: Details, Order
Thtyrosine hydroxylaseFI172
(congenic C57BL/6J)
Cre Transgenic Cre mouse, Th gene, backcrossed
sagittal images only
B6.FVB(Cg)-Tg(Th-cre)FI172Gsat/Mmucd: Details, Order
Thbs3thrombospondin 3SW52-CRECre Transgenic Cre mouse, Thbs3 geneSTOCK Tg(Thbs3-cre)SW52Gsat/Mmucd: Details, Order
Thbs3thrombospondin 3SW48-CRECre Transgenic Cre mouse, Thbs3 geneNA
Tlx3T cell leukemia, homeobox 3PL56-CRECre Transgenic Cre mouse, Tlx3 geneSTOCK Tg(Tlx3-cre)PL56Gsat/Mmucd: Details, Order
Tlx3T cell leukemia, homeobox 3PL58-CRECre Transgenic Cre mouse, Tlx3 geneSTOCK Tg(Tlx3-cre)PL58Gsat/Mmucd: Details, Order
Tph2tryptophan hydroxylase 2RH35-CRECre Transgenic Cre mouse, Tph2 geneSTOCK Tg(Tph2-cre)RH35Gsat/Mmucd: Details, Order
Trpv1transient receptor potential cation channel, subfamily V, member 1SK30-CRECre Transgenic Cre mouse, Trpv1 geneSTOCK Tg(Trpv1-cre)SK30Gsat/Mmucd: Details, Order
Uchl1ubiquitin carboxy-terminal hydrolase L1NO63-CRECre Transgenic Cre mouse, Uchl1 geneSTOCK Tg(Uchl1-cre)NO63Gsat/Mmucd: Details, Order
Ucn3urocortin 3KF43CreCre restricted to hypothalamus (principally lateral hypothalamus), some in medial amygdala Transgenic Cre mouse, Ucn3 geneSTOCK Tg(Ucn3-cre)KF43Gsat/Mmucd: Details, Order
Ucn3urocortin 3KF31Creexpression in specific hypothalamic nuclei Transgenic Cre mouse, Ucn3 geneSTOCK Tg(Ucn3-cre)KF31Gsat/Mmucd: Details, Order
Vipvasoactive intestinal polypeptidePH13-CRECre Transgenic Cre mouse, Vip geneSTOCK Tg(Vip-cre)PH13Gsat/Mmucd: Details, Order
Vipr2vasoactive intestinal peptide receptor 2KE2CreCEREBRAL CORTEX: layer 5 in neocortex
STRIATUM: both direct and indirect pathway medium spiny neurons
Transgenic Cre mouse, Vipr2 geneSTOCK Tg(Vipr2-cre)KE2Gsat/Mmucd: Details, Order
Vipr2vasoactive intestinal peptide receptor 2KH234Creexpression in specific layers of cerebral cortex, in specific thalamic nuclei, and midbrain (superior colliculus and LGN) Transgenic Cre mouse, Vipr2 geneNA
Vmn1r206vomeronasal 1 receptor 206SN45-CRECre Transgenic Cre mouse, Vmn1r206 geneSTOCK Tg(Vmn1r206-cre)SN45Gsat/Mmucd: Details, Order
Vsx2visual system homeobox 2TC9-CRECre Transgenic Cre mouse, Vsx2 geneSTOCK Tg(Vsx2-cre)TC9Gsat/Mmucd: Details, Order
Wnt5awingless-related MMTV integration site 5AML21-CRECreGLIA: mostly astrocytes throughout brain, but more in thalamus,hypothalamus, midbrain and brainstem Transgenic Cre mouse, Wnt5a geneSTOCK Tg(Wnt5a-cre)ML21Gsat/Mmucd: Details, Order
Wnt5awingless-related MMTV integration site 5AML10-CRECreGLIA: mostly astrocytes throughout brain, but more in thalamus,hypothalamus, midbrain and brainstem Transgenic Cre mouse, Wnt5a geneSTOCK Tg(Wnt5a-cre)ML10Gsat/Mmucd: Details, Order
Wnt5awingless-related MMTV integration site 5AML7-CRECreGLIA: mostly astrocytes throughout brain, but more in thalamus,hypothalamus, midbrain and brainstem Transgenic Cre mouse, Wnt5a geneSTOCK Tg(Wnt5a-cre)ML7Gsat/Mmucd: Details, Order

148 total genes of which 147 genes have images...
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